Human

Statistics about the GENCODE Release 40)

The statistics derive from the gtf file that contains only the annotation of the main chromosomes.

For details about the calculation of these statistics please see the README_stats.txt file.

General stats

Further details on this version's gene and transcript types

biotype	genes	transcripts
IG_C_gene	14	23
IG_C_pseudogene	9	9
IG_D_gene	37	37
IG_J_gene	18	18
IG_J_pseudogene	3	3
IG_pseudogene	1	1
IG_V_gene	145	145
IG_V_pseudogene	187	187
lncRNA	17748	51324
miRNA	1879	1879
misc_RNA	2212	2212
Mt_rRNA	2	2
Mt_tRNA	22	22
non_stop_decay	0	99
nonsense_mediated_decay	0	20254
polymorphic_pseudogene	50	71
processed_pseudogene	10154	10156
processed_transcript	0	30375
protein_coding	19988	87814
pseudogene	15	15
retained_intron	0	32826
ribozyme	8	8
rRNA	47	47
rRNA_pseudogene	497	497
scaRNA	49	49
scRNA	1	1
snoRNA	943	943
snRNA	1901	1901
sRNA	5	5
TEC	1057	1147
TR_C_gene	6	6
TR_D_gene	4	4
TR_J_gene	79	79
TR_J_pseudogene	4	4
TR_V_gene	106	106
TR_V_pseudogene	33	33
transcribed_processed_pseudogene	505	505
transcribed_unitary_pseudogene	149	151
transcribed_unprocessed_pseudogene	954	954
translated_processed_pseudogene	2	2
translated_unprocessed_pseudogene	2	2
unitary_pseudogene	97	96
unprocessed_pseudogene	2610	2611
vault_RNA	1	1