Human

Statistics about the GENCODE Release 20

The statistics derive from the gtf file that contains only the annotation of the main chromosomes.

For details about the calculation of these statistics please see the README_stats.txt file.

General stats

Further details on this version's gene and transcript types

biotype	genes	transcripts
3prime_overlapping_ncrna	21	23
antisense	5411	10033
IG_C_gene	14	30
IG_C_pseudogene	9	9
IG_D_gene	37	37
IG_J_gene	18	18
IG_J_pseudogene	3	3
IG_V_gene	136	154
IG_V_pseudogene	182	182
lincRNA	7408	12186
miRNA	3828	3828
misc_RNA	2232	2246
Mt_rRNA	2	2
Mt_tRNA	22	22
non_stop_decay	0	72
nonsense_mediated_decay	0	13229
polymorphic_pseudogene	26	40
processed_pseudogene	10303	10307
processed_transcript	531	27335
protein_coding	19942	79460
pseudogene	2	19
retained_intron	0	26334
rRNA	545	545
sense_intronic	910	964
sense_overlapping	189	317
snoRNA	978	978
snRNA	1912	1912
TR_C_gene	5	19
TR_D_gene	3	3
TR_J_gene	73	73
TR_J_pseudogene	4	4
TR_V_gene	106	111
TR_V_pseudogene	28	28
transcribed_processed_pseudogene	433	433
transcribed_unprocessed_pseudogene	643	644
translated_processed_pseudogene	2	2
unitary_pseudogene	171	171
unprocessed_pseudogene	2559	2561