Human

Statistics about the GENCODE Release 16

The statistics derive from the gtf file that contains only the annotation of the main chromosomes.

For details about the calculation of these statistics please see the README_stats.txt file.

General stats

Further details on this version's gene and transcript types

biotype	genes	transcripts
3prime_overlapping_ncrna	38	45
ambiguous_orf	0	52
antisense	4545	7895
IG_C_gene	14	18
IG_C_pseudogene	8	9
IG_D_gene	27	27
IG_J_gene	18	18
IG_J_pseudogene	3	3
IG_V_gene	126	130
IG_V_pseudogene	155	159
lincRNA	5835	9391
miRNA	3116	3116
misc_RNA	2050	2050
Mt_rRNA	2	2
Mt_tRNA	22	22
non_coding	13	25
non_stop_decay	0	52
nonsense_mediated_decay	0	12808
polymorphic_pseudogene	26	41
processed_pseudogene	0	10105
processed_transcript	1990	31583
protein_coding	20387	81626
pseudogene	13196	387
retained_intron	0	25466
rRNA	531	531
sense_intronic	657	715
sense_overlapping	142	173
snoRNA	1529	1529
snRNA	1923	1923
TEC	0	98
TR_C_gene	5	5
TR_D_gene	3	3
TR_J_gene	74	74
TR_J_pseudogene	4	4
TR_V_gene	97	97
TR_V_pseudogene	27	27
transcribed_processed_pseudogene	0	350
transcribed_unprocessed_pseudogene	0	533
unitary_pseudogene	0	178
unprocessed_pseudogene	0	2764