Human

Statistics about the GENCODE Release 13

The statistics derive from the gtf file that contains only the annotation of the main chromosomes.

For details about the calculation of these statistics please see the README_stats.txt file.

General stats

Further details on this version's gene and transcript types

biotype	genes	transcripts
3prime_overlapping_ncrna	31	40
ambiguous_orf	0	59
antisense	4220	6534
IG_C_gene	14	18
IG_C_pseudogene	8	9
IG_D_gene	27	27
IG_J_gene	18	18
IG_J_pseudogene	3	3
IG_V_gene	126	130
IG_V_pseudogene	151	153
lincRNA	6096	7938
miRNA	3116	3116
misc_RNA	2050	2050
Mt_rRNA	2	2
Mt_tRNA	22	22
non_coding	12	15
non_stop_decay	0	15
nonsense_mediated_decay	0	11549
polymorphic_pseudogene	31	46
processed_pseudogene	0	9953
processed_transcript	1335	31617
protein_coding	20070	77901
pseudogene	12899	388
retained_intron	0	22655
retrotransposed	0	210
rRNA	531	531
sense_intronic	557	606
sense_overlapping	142	175
snoRNA	1529	1529
snRNA	1923	1923
TEC	0	98
TR_C_gene	5	5
TR_D_gene	3	3
TR_J_gene	74	74
TR_J_pseudogene	4	4
TR_V_gene	97	97
TR_V_pseudogene	27	27
transcribed_processed_pseudogene	0	248
transcribed_unprocessed_pseudogene	0	453
unitary_pseudogene	0	175
unprocessed_pseudogene	0	2551